CDS

Accession Number TCMCG051C27169
gbkey CDS
Protein Id XP_024463220.1
Location join(18245717..18245854,18245927..18246061,18246187..18246327,18246431..18246562,18246751..18246936,18247133..18247210,18247399..18247518,18248374..18248472,18248625..18248742,18248966..18249234,18249345..18249539,18256652..18256794,18256953..18257037,18257117..18257326,18257668..18257820,18258099..18258203,18258310..18258501)
Gene LOC18096529
GeneID 18096529
Organism Populus trichocarpa

Protein

Length 832aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024607452.1
Definition probable acyl-CoA dehydrogenase IBR3 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category I
Description Acyl-CoA dehydrogenase family member
KEGG_TC -
KEGG_Module M00013        [VIEW IN KEGG]
M00036        [VIEW IN KEGG]
M00087        [VIEW IN KEGG]
KEGG_Reaction R00924        [VIEW IN KEGG]
R01175        [VIEW IN KEGG]
R01279        [VIEW IN KEGG]
R02661        [VIEW IN KEGG]
R03172        [VIEW IN KEGG]
R03777        [VIEW IN KEGG]
R03857        [VIEW IN KEGG]
R03990        [VIEW IN KEGG]
R04095        [VIEW IN KEGG]
R04432        [VIEW IN KEGG]
R04751        [VIEW IN KEGG]
R04754        [VIEW IN KEGG]
KEGG_rclass RC00052        [VIEW IN KEGG]
RC00068        [VIEW IN KEGG]
RC00076        [VIEW IN KEGG]
RC00095        [VIEW IN KEGG]
RC00148        [VIEW IN KEGG]
RC00246        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00249        [VIEW IN KEGG]
EC 1.3.8.7        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00071        [VIEW IN KEGG]
ko00280        [VIEW IN KEGG]
ko00410        [VIEW IN KEGG]
ko00640        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko01212        [VIEW IN KEGG]
ko03320        [VIEW IN KEGG]
map00071        [VIEW IN KEGG]
map00280        [VIEW IN KEGG]
map00410        [VIEW IN KEGG]
map00640        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map01212        [VIEW IN KEGG]
map03320        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003995        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006631        [VIEW IN EMBL-EBI]
GO:0006635        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009062        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010053        [VIEW IN EMBL-EBI]
GO:0010054        [VIEW IN EMBL-EBI]
GO:0016042        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016054        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0019395        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030258        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0033539        [VIEW IN EMBL-EBI]
GO:0034440        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044242        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044282        [VIEW IN EMBL-EBI]
GO:0046395        [VIEW IN EMBL-EBI]
GO:0048037        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048469        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048764        [VIEW IN EMBL-EBI]
GO:0048765        [VIEW IN EMBL-EBI]
GO:0048767        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050660        [VIEW IN EMBL-EBI]
GO:0050662        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072329        [VIEW IN EMBL-EBI]
GO:0080147        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090627        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAGTCATACGTCTGCTCTGTTAAGACAAGTTCAAGTAGCTCACCAATTCGATTACGACTCCTTGCTCCGCTATGCCTCTGTCCATGTCCCTGGCTTCCCTTCCTCTGCACCTTCATCTTTCACTGTCAAACAGTTTGGACATGGACAATCGAATCCTACGTTTTTATTGGAAGTGGAAAATGGAGGTTTCGTGAAACGCTACGTTGTGAGGAAGAAACCGCCTGGTAAATTGCTTCAGTCTGCTCATGCTGTTGATAGAGAATATCAGGTTCTTCGGGCGCTGGGAGAAAGTACAAAAGTTCCAGTGCCCAAAGTGTTTTGTTTGTGTAGGGATGCGAGTGTGATTGGAACTGATTTTTATGTAATGGAGTATTTGGAAGGACGCATTTTCATAGATCCTAAGCTTCCGGGTTTGGCACCAGAGAGGAGAGGGGCAATTTATAGAGAAATTGCTAAAGTATTGGCTGCTTTACATTCTGTTGATGTGGATGCTATTGGTTTAGGAATATATGGACGTCGAGACCACTATTGTAAAAGACAGGTAGAGAGATGGACCAAACAATATATTGCATCAACATGTGATAGCAGGTATCCGAGTAATCCAAAGATGTTGGAGCTGGCTCAATGGTTGCTGCAACATATTCCTAGTGAAGATTCCTCAAGAGCATCGGGAGGAATTGTTCATGGAGACTTTCGCATAGATAACGTTGTATTTCATCCCAACGAGGATCGAGTAATTGGTATTCTTGACTGGGAATTATCCACGCTGGGAAACCAGATGACTGATGTTGCGTACAGCTGTTTGGCTTACAATGTTGATATTAACCTTGAAAATCAACAAGCGGGTAAAGGTTTTGAACTTACCGGAATTCCAGAAGGAATTCCTTCACAGGCAGAATTTTTGGCAGAATACTGCTCTGCATCAGGAAAACCGTGGCCTGCTTCTGTGTGGAAGTTCTATGTTGCCTTTGCTATGTTTCGTGGGGCAGCAATCTTTGCAGGGATATACAGTCGATGGCTTATGGGCAATGCCTCAGGAGGTGAGCGTGCTCGAAATTCAGGAAAGCAAGCTAATGATCTTGTAGACTTTGCATGGGCTTATATTGCAAAAAAATCTGTTCTTCCTGATCACCCTGCATCAGTGTGCTATTCTCTTAACTATCCAGTTCTAATTGCACGAGATTGCATGAAACAATTTGGTGACGGGAATGCAAGTGGGAGATTTGTTCCTAGCAAAAGGGTCCTAACATTGAGGAACAGGTTAATCAAGTTTGTGGAAGATCATATTTACCCCATGGAGAATGAGTTCTATAAACTTGCTCAGTCTCCTTCACGTTGGACAGTGCACCCAGAGGAAGAGAGGTTAAAGGAGCTGGCAAAGAAAGAAGGATTGTGGAACTTATGGATACCTTTCGATAGTGCTGAGAGAGCTAGAAAATTACTATTTGATGGGAGTGGTCATATGATCTCTAATGGTGAGCATGATCAGTTCCTTGGTGCGGGTCTCTCAAACCTTGAATATGGATACCTCTGTGAGATCATGGGGCGTTCAATTTGGGCTCCACAGGTCTTAAATTGTGGCGCACCTGACACAGGAAATATGGAGGTATTGTTGCGCTACGGGAATAAAGAACATCTACTTGAATGGCTAGTTCCATTGCTTCAAGGAAAGATCCGCTCTGGATTTGCAATGACAGAACCACAAGTTGCATCATCGGATGCAACGAATATTGAGTGTTCCATTAGAAGAGAAGGGGATTCCTACATCATTAACGGTAGGAAGTGGTGGACAAGTGGAGCAATGGATCCAAGGTGTAAAGTTCTTATAGTCATGGGAAAAACAGACTTCACTGCTGCTAATCACAAGCAACAGTCTATGATATTGGTAGACATTCATACTCCTGGTGTACACATAAAAAGGCCACTTATGGTCTTTGGCTTCGATGATGCACCTCATGGCCATGCTGAAGTTGTATTTGATAATGTACGTGTTCCTGCAAAGAACATTCTACTGGGAGAAGGACGTGGATTTGAGATTGCGCAGGGGAGACTGGGCCCTGGAAGATTGCACCACTGCATGAGATTGATAGGTGCTGCTGAACGTGGCATGCAGATGATGGTTCAAAGGGCTCTCAGCAGAAGAGCATTTGGAAAATTAATTGCAGAGCAGGGTGCATTTCGATCAGATGTTGCCAAGTGTCGAATAGAGCTTGAGAAGGCCAGACTATTGGTGCTTGAGGCAGCTGATCAGCTTGATCGGCTTGGAAACAAAAAAGCCCGTGGTACCATTGCGATGGCCAAGGTAGCAGCTCCAAATATGGCACTCATGGTTCTTGACATGGCAATGCAAGTGCATGGCGCTGCTGGCTTATCATCTGACACCGTTTTAGCCCATCTTTGGGCAACTGCAAGAACACTGAGAATTGCAGATGGCCCTGATGAAGTTCACTTGGGTACTATTGCCAAGTTGGAATTACAGAGAGCTAAGCTTTAA
Protein:  
MASHTSALLRQVQVAHQFDYDSLLRYASVHVPGFPSSAPSSFTVKQFGHGQSNPTFLLEVENGGFVKRYVVRKKPPGKLLQSAHAVDREYQVLRALGESTKVPVPKVFCLCRDASVIGTDFYVMEYLEGRIFIDPKLPGLAPERRGAIYREIAKVLAALHSVDVDAIGLGIYGRRDHYCKRQVERWTKQYIASTCDSRYPSNPKMLELAQWLLQHIPSEDSSRASGGIVHGDFRIDNVVFHPNEDRVIGILDWELSTLGNQMTDVAYSCLAYNVDINLENQQAGKGFELTGIPEGIPSQAEFLAEYCSASGKPWPASVWKFYVAFAMFRGAAIFAGIYSRWLMGNASGGERARNSGKQANDLVDFAWAYIAKKSVLPDHPASVCYSLNYPVLIARDCMKQFGDGNASGRFVPSKRVLTLRNRLIKFVEDHIYPMENEFYKLAQSPSRWTVHPEEERLKELAKKEGLWNLWIPFDSAERARKLLFDGSGHMISNGEHDQFLGAGLSNLEYGYLCEIMGRSIWAPQVLNCGAPDTGNMEVLLRYGNKEHLLEWLVPLLQGKIRSGFAMTEPQVASSDATNIECSIRREGDSYIINGRKWWTSGAMDPRCKVLIVMGKTDFTAANHKQQSMILVDIHTPGVHIKRPLMVFGFDDAPHGHAEVVFDNVRVPAKNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMQMMVQRALSRRAFGKLIAEQGAFRSDVAKCRIELEKARLLVLEAADQLDRLGNKKARGTIAMAKVAAPNMALMVLDMAMQVHGAAGLSSDTVLAHLWATARTLRIADGPDEVHLGTIAKLELQRAKL